Infrared Light Offers a Cooler Way to Defrost - Scientific American podcast:
https://www.scientificamerican.com/podcast/episode/infrared-light-offers-a-cooler-way-to-defrost/
Labyrinth ice pattern formation induced by near-infrared irradiation :
http://advances.sciencemag.org/content/5/3/eaav1598?rss=1
https://www.nature.com/articles/d41586-019-01005-z
First author student Shlomit Guy Preis.
Phys.org How antifreeze proteins make ice crystals grow
Makor Rishon article on 3d Printing of Food by Professors Braslavsky and Shoseyov
Food Printing in the news Oct 2017: NRG, Jerusalem post.
The Atlantic: The Counterintuitive Way That Microbes Survive in Antarctica
The Economist, Feb 6th 2016 + Economist podcast (first 5 minutes)
HORIZON: the EU Research & Innovation magazine, October 2014
National Geographic article (המהדורה הישראלית), July 2013
Nature Methods cover of PNAS paper, March 2013
Science Daily, February 2013
Jerusalem Post on PNAS article, February 2013
Cover of the Roy Soc Interface, December 7 2012 issue.
Krill prize 2012
ERC Starter Grant 2011: Improved Cryopreservation using Ice Binding Proteins, HUJI Newsletter
PNAS 2010 Superheating: Ohio University , ScienceDaily, PhysOrg, 'In this Issue' section PNAS March 23 2010
NQPI news letter, Fall 2009, Team studies inner workings of anti-freeze proteins, by Emily Hubbell
BBC: Sub-zero proteins transform dessert, by Victoria Gill , Aug 2009
Cold Case : Office of Research Communications, Ohio University, May 2009
EMBO reports DOI: 10.1038/embor.2008.160 (Sep 2008) Philip Hunter, Harnessing Nature's wisdom. Turning to Nature for inspiration and avoiding her follies,
In sequence, Volume 2 - Number 15 | April 8, 2008 : Helicos Publishes M13 Genome Re-Sequencing Data , related article Physics Today, May 2007, Feb 2008 APS News: "Physics News in 2007" Related article
Perspectives: Research, Scholarship, and Creative Activity at Ohio University: Fending Off Freeze, Proteins take a bite out of frost
APS2007 : Scientific American , Physics update , ScienceDaily, Ohio University Press release
Ohio University NanoSpintronics and Nanomagnetics web site: "Brain Freeze" , by Anita Martin
APS 2006, Virtual pressroom, title: "Fluorescence microscopy studies of the antifreeze proteins"
Physics News Update 2003 Related article
Articles
58) Ice nucleation proteins self-assemble into large fibres to trigger freezing at near 0 °C, Thomas Hansen, Jocelyn Lee, Naama Reicher, Gil Ovadia, Shuaiqi Guo, Wangbiao Guo, Jun Liu, Ido Braslavsky, Yinon Rudich, Peter L Davies (2023) eLife 12:RP91976 https://doi.org/10.7554/eLife.91976.3
57) Accumulation of antifreeze proteins on ice is determined by adsorption, Thosar AU, Shalom Y, Braslavsky I, Drori R, Patel AJ, (2023) J. Am. Chem. Soc., 145:17597. https://pubs.acs.org/doi/10.1021/jacs.3c02705
56) Monitoring of freezing patterns within 3d collagen-Hydroxyapatite scaffolds using infrared thermography, Mutsenko V, Anastassopoulos E, Zaragotas D, Simaioforidou A, Tarusin D, Lauterboeck L, Sydykov B, Brunotte R, Brunotte K , Rozanski C, Petrenko AU, Braslavsky I, Glasmacher B and Gryshkov O,(2023), Cryobiology 111:57, https://doi.org/10.1016/j.cryobiol.2023.02.001,
55) Atomic force microscopy imaging of ice crystal surfaces formed in aqueous solutions containing ice-binding proteins, Chasnitsky M S, Cohen SR C, Rudich Y PI, Braslavsky I PI (2022), Journal of Crystal Growth, in a special issue for A. Chernov, edited by Jim DeYoreo. In Press, https://doi.org/10.1016/j.jcrysgro.2022.126961
54) Water-organizing motif continuity is critical for potent ice nucleation protein activity. Forbes, J., Bissoyi, A., Eickhoff, L., N. Reicher, T Hansen, CG. Bon, VK. Walker, T Koop, Y Rudich, I Braslavsky & PL. Davies, 2022, Nature Communications, 13, 5019; https://doi.org/10.1038/s41467-022-32469-9
53) Temperature Effect on Polymerase Fidelity, Xue Y, Braslavsky I, Quake SR, 2021, Journal of Biological Chemistry, 297(5):101270. https://doi.org/10.1016/j.jbc.2021.101270,
52) Adherent cell thawing by infrared radiation, A Bissoyi and I Braslavsky, 2021, Cryobiology,103,129; https://doi.org/10.1016/j.cryobiol.2021.08.002
51) Heat flux balance description of unidirectional freezing and melting dynamics on a translational temperature gradient stage, Michael Chasnitsky, Victor Yashunsky, Ido Braslavsky, International Journal of Thermal Sciences, 2020, 161, 106734; https://doi.org/10.1016/j.ijthermalsci.2020.106734
50) Ice Nucleation Properties of Ice-binding Proteins from Snow Fleas, Akalabya Bissoyi, Naama Reicher, Michael Chasnitsky, Sivan Arad,Thomas Koop,Yinon Rudich and Ido Braslavsky, Biomolecules 2019, 9(10), 532; https://doi.org/10.3390/biom9100532 (movie)
49) Improvement of sperm cryo-survival of cynomolgus macaque (Macaca fascicularis) by commercial egg-yolk–free freezing medium with type III antifreeze protein, Shengnan Wang, Yanchao Duan, YapingYan, Chen Adar, Ido Braslavsky, Bingbing Chen, Tianzhuang Huang, Shuai Qiu, Xi Li, Briauna Marie Inglis, Weizhi Ji, Wei Si, Animal Reproduction Science, 2019. 210,106177, https://doi.org/10.1016/j.anireprosci.2019.106177
48) Addressing Complex Matrix Interference Improves Multiplex Food Allergen Detection by Targeted LC–MS/MS, Derek Croote, Ido Braslavsky, Stephen R. Quake, Analytical Chemistry, 2019. https://doi.org/10.1021/acs.analchem.9b01388
47) Direct Cryo Writing of Aerogels via 3D Printing of Aligned Cellulose Nanocrystals Inspired by the Plant Cell Wall Doron Kam,Michael Chasnitsky, Chen Nowogrodski ,Ido Braslavsky,Tiffany Abitbol ,Shlomo Magdassi andOded Shoseyov (2019), Colloids Interfaces 2019, 3(2), 46; https://doi.org/10.3390/colloids3020046
46) Ice-binding proteins and the applicability and limitations of the kinetic pinning model, Chasnitsky M, Braslavsky I. (2019) .Phil. Trans. R. Soc. A 377: 20180391. https://doi.org/10.1098/rsta.2018.0391
45) Labyrinth ice pattern formation induced by near-infrared irradiation, Shlomit Guy Preis, Haim Chayet, Adam Katz, Victor Yashunsky, Avigail Kaner, Shimon Ullman, Ido Braslavsky, (2019), Science Advances, Vol 5, eaav1598. DOI: 10.1126/sciadv.aav1598,
https://www.nature.com/articles/d41586-019-01005-z
https://twitter.com/sciencemagazine/status1111984066734243840
44) Contrasting Behavior of Antifreeze Proteins: Ice Growth Inhibitors and Ice Nucleation Promotors, Lukas Eickhoff, Katharina Dreischmeier, Assaf Zipori, Vera Sirotinskaya, Chen Adar, Naama Reicher, Ido Braslavsky, Yinon Rudich, and Thomas Koop,J. Phys. Chem. Lett.2019105966-972, DOI: 10.1021/acs.jpclett.8b03719 Phys.org, ScienceDaily, EurekAlert!
43) Saturn-shaped ice burst pattern and fast basal binding of an ice-binding protein from an Antarctic bacterial consortium, Aleksei Kaleda, Lotem Haleva, Guy Sarusi, Tova Pinsky, Marco Mangiagalli, Maya Bar-Dolev, Marina Lotti, Marco Nardini, and Ido Braslavsky, Langmuir 2019 35,23, 7337-7346, DOI:10.1021/acs.langmuir.8b01914
42) Falling water ice affinity purification of ice-binding proteins, Chen Adar, Vera Sirotinskaya, Maya Bar Dolev, Tomer Friehmann, Ido Braslavsky, Scientific Reports 23 July 2018 https://doi.org/10.1038/s41598-018-29312-x
41) Protein-Water-Ice Contact Angle, Karlsson JOM, Braslavsky I, Elliott JAW . Langmuir 2019, 35, 23, 7383-7387. doi: 10.1021/acs.langmuir.8b01276.
40) Application of Algebraic Topology to Homologous Recombination of DNA Ido Braslavsky and Joel Stavans, iScience, (2018) 4, 64-67, https://doi.org/10.1016/j.isci.2018.05.008
39) Directional freezing for the cryopreservation of adherent mammalian cells on a substrate. Bahari L, Bein A, Yashunsky V, Braslavsky I (2018) PLoS ONE 13(2): e0192265. doi: https://doi.org/10.1371/journal.pone.0192265
38) Structure of a bacterial ice binding protein with two faces of interaction with ice. Mangiagalli M, Sarusi G, Kaleda A, Bar Dolev M, Nardone V , Vena VF, Braslavsky I, Lotti M, Nardini M . (2018) FEBS J. 285(9):1653-1666. doi: 10.1111/febs.14434
37) Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice, Shuaiqi Guo, Corey A. Stevens, Tyler D. R. Vance, Luuk L. C. Olijve, Laurie A. Graham, Robert L. Campbell, Saeed R. Yazdi, Carlos Escobedo, Maya Bar-Dolev, Victor Yashunsky, Ido Braslavsky, David N. Langelaan, Steven P. Smith, John S. Allingham, Ilja K. Voets and Peter L. Davies, Science Advances 09 Aug 2017:Vol. 3, no. 8, e1701440 DOI: 10.1126/sciadv.1701440 http://advances.sciencemag.org/content/3/8/e1701440
36) Ice-binding proteins—not only for ice growth control, Maya Bar Dolev & Ido Braslavsky (2017) Temperature, 4:2, 112-113, DOI: 10.1080/23328940.2017.1279255 http://www.tandfonline.com/doi/pdf/10.1080/23328940.2017.1279255
35) Cryo-protective effect of an ice-binding protein derived from Antarctic bacteria Marco Mangiagalli, Maya Bar-Dolev, Pietro Tedesco, Antonino Natalello, Aleksei Kaleda, Stefania Brocca, Donatella de Pascale, Sandra Pucciarelli, Cristina Miceli, Ido Braslavsky, Marina Lottio 2016 FEBS J 284:163-177 http://dx.doi.org/10.1111/febs.13965
34) Microfluidic Cold-Finger Device for the Investigation of Ice-Binding Proteins Lotem Haleva, Yeliz Celik, Maya Bar-Dolev, Natalya Pertaya-Braun, Avigail Kaner, Peter L. Davies, Ido Braslavsky Biophysical Journal, 111(6) 1143–1150 DOI: http://dx.doi.org/10.1016/j.bpj.2016.08.003
33) Putting life on ice: bacteria that bind to frozen water Maya Bar Dolev, Reut Bernheim, Shuaiqi Guo, Peter L. Davies, Ido Braslavsky J. R. Soc. Interface 13: 20160210. DOI: 10.1098/rsif.2016.0210
PDF movies Link to Interface Blog regarding the article.
32) Ice-Binding Proteins and Their Function, Maya Bar Dolev, Ido Braslavsky, and Peter L. Davies, Annu. Rev. Biochem. 2016. 85:515–42 DOI: 10.1146/annurev-biochem-060815-014546
31) The Grand Challenges of Organ Banking: Proceedings from the first global summit on complex tissue cryopreservation Jedediah K.Lewis, John C.Bischof, Ido Braslavsky, Kelvin G.M.Brockbank, Gregory M.Fahy, Barry J.Fuller, Yoed Rabin, Alessandro Tocchio, Erik J.Woods, Brian G.Wowk, Jason P.Acke, Sebastian Giwa, 2016, Cryobiology, 72:169-182, DOI:10.1016/j.cryobiol.2015.12.001
30) Stevens CA, Drori R, Zalis S , Braslavsky I , Davies PL. (2015) Dendrimer-Linked Antifreeze Proteins Have Superior Activity and Thermal Recovery. Bioconjug Chem. 26:1908-15.
29) "When are antifreeze proteins in solution essential for ice growth inhibition?", Ran Drori , Peter L. Davies , and Ido Braslavsky, Langmuir 31:5805–5811 DOI: 10.1021/acs.langmuir.5b00345
28) “Experimental Correlation between Thermal Hysteresis Activity and the Distance between Antifreeze Proteins on an Ice Surface”, Ran Drori, Peter L. Davies and Ido Braslavsky, RSC Adv., 2015,5, 7848-7853 . DOI: 10.1039/C4RA12638F
27) "Ice-Binding Proteins that Accumulate on Different Ice Crystal Planes Produces Distinct Thermal Hysteresis Dynamics", Drori, R., Celik, Y., Davies, P.L., and Braslavsky, I., 9 July 2014 doi: 10.1098/ rsif.2014.0526 J. R. Soc. Interface 6 September 2014 vol. 11
26) "Determining the ice-binding planes of antifreeze proteins by fluorescence-based ice plane affinity", Basu, K., Garnham, C.P., Nishimiya, Y., Tsuda, S., Braslavsky, I., Davies, P.L.. Jan 2014. J. Vis. Exp. (83), e51185 PubMed: 24457629
25) "Model of pore formation in a single cell in a flow-through channel with micro-electrodes", Kaner A, Braslavsky I, Rubinsky B., Biomed Microdevices. 16:181–189 https://doi.org/10.1007/s10544-013-9820-6 2013 Oct 23
24) "Recent experimental results show the irreversible binding of antifreeze proteins to ice surfaces", Yeliz Celik, Ran Drori, Natalya Pertaya-Braun, Maya Bar-Dolev, Peter L. Davies, Ido Braslavsky. Cryobiology and cryotechnology 59(1), 15-21, 2013
23) "Inhibition of ice growth and recrystallization by zirconium acetate and zirconium acetate hydroxide", Ortal Mizrahy, Maya Bar-Dolev, Shlomit Guy and Ido Braslavsky, (2013) Plos One, 8(3): e59540. doi:10.1371/journal.pone.0059540
22) "Microfluidic experiments reveal that antifreeze proteins bound to ice crystals suffice to prevent their growth", Yeliz Celik, Ran Drori, Natalya Pertaya-Braun, Aysun Altan, Tyler Barton, Maya Bar-Dolev, Alex Groisman, Peter L. Davies, and Ido Braslavsky, PNAS. January 22, 2013.110(4)1309-1314.
21) "LabVIEW-operated Novel Nanoliter Osmometer for Ice Binding Protein Investigations", Ido Braslavsky, Ran Drori, Journal of Visualized Experiments. JoVE (72), e4189, doi:10.3791/4189 (2013).
20) "New Insights into Ice Growth and Melting Modifications by Antifreeze Proteins", Maya Bar-Dolev, Yeliz Celik, J.S. Wettlaufer, Peter L. Davies, and Ido Braslavsky, (2012) J. Royal Society Interface, 2012, 9:3249-59. https://doi.org/10.1098/rsif.2012.0388, Cover of the December 7 2012 issue.
19) “Modeling the Influence of Antifreeze Proteins on Three-Dimensional Ice Crystal Melt Shapes using a Geometric Approach” Jun Jie Liu, Yangzong Qin, Maya Bar Dolev, Yeliz Celik, J. S. Wettlaufer, and Ido Braslavsky, (2012) Proceedings of the Royal Society A, 2012, 468(2147):3311-3322. https://doi.org/10.1098/rspa.2011.0720
18) "Antifreeze Protein from Freeze-Tolerant Grass Has a Beta-Roll Fold with an Irregularly Structured Ice-Binding Site", Adam J. Middleton, Christopher B. Marshall, Frédérick Faucher, Maya Bar-Dolev, Ido Braslavsky, Robert L. Campbell, Virginia K. Walker, Peter L. Davies, Journal of Molecular Biology, 2012 416:713–724.
17) "Compound ice-binding site of an antifreeze protein revealed by mutagenesis and fluorescent tagging" Christopher P. Garnham , Aditya Natarajan , Adam J. Middleton , Mike J. Kuiper , Ido Braslavsky , and Peter L. Davies, 2010 , Biochemistry, 49: 9063-9071.
16) "Superheating of ice crystals in antifreeze protein solutions", Yeliz Celik, Laurie A. Graham, Yee-Foong Mok, Maya Bar, Peter L. Davies, and Ido Braslavsky, PNAS, 2010 107(12)5423-5428, pdf, Supporting information , 'In this Issue' section PNAS March 23 2010, Related news item 2014
15) "Structural basis for the superior activity of the large isoform of snow flea antifreeze protein", Mok YF,Lin FH,Graham LA,Celik Y,Braslavsky I,Davies PL., Biochemistry, 2010 49(11)2593-2603
14) "Caught in the act: the lifetime of synaptic intermediates during the search for homology on DNA", Adam Mani, Ido Braslavsky, Rinat Arbel-Goren, and Joel Stavans, Nucleic Acids Research 38:2036–2043, https://doi.org/10.1093/nar/gkp1177
13) "Universality of Persistence Exponents in Twodimensional Ostwald Ripening", Jordi Soriano, Ido Braslavsky, Di Xu, Oleg Krichevsky and Joel Stavans, PRL, 2009, 103(22)226101.
12) "Direct visualization of spruce budworm antifreeze protein interacting with an ice crystal: basal plane affinity confers hyperactivity" Natalya Pertaya, Christopher B. Marshall, Yeliz Celik, Peter L. Davies, Ido Braslavsky, Biophysical Journal, 2008, 95(1)333-342. related news
11) "Interactions of β-helical Antifreeze Protein Mutants with Ice", Maya Bar, Yeliz Celik, Deborah Fass, Ido Braslavsky, Crystal Growth & Design 2008, 8, 8, 2954-2963 https://doi.org/10.1021/cg800066g
10) "Single Molecule DNA Sequencing of a Viral Genome", Timothy D. Harris, Phillip R. Buzby, Hazen Babcock, Eric Beer, Jayson Bowers, Ido Braslavsky, Marie Causey, Jennifer Colonell, James DiMeo, J. William Efcavitch, Eldar Giladi, Jaime Gill, John Healy, Mirna Jarosz, Dan Lapen, Keith Moulton, Stephen R. Quake, Kathleen Steinmann, Edward Thayer, Anastasia Tyurina, Rebecca Ward, Howard Weiss, Zheng Xie,Science, April 4, 2008, Vol. 320 pp. 106-109
9) "Growth-melt asymmetry in ice crystals under the influence of spruce budworm antifreeze protein", Natalya Pertaya, Yeliz Celik, Carlos L. DiPrinzio, J. S. Wettlaufer, Peter L. Davies, Ido Braslavsky. J. Phys.: Condens. Matter 19 (2007) 412101 https://doi.org/10.1088/0953-8984/19/41/412101
8) "Fluorescence microscopy evidence for quasi-permanent attachment of antifreeze proteins to ice surfaces", Natalya Pertaya, Christopher B. Marshall, Carlos L. DiPrinzio, Larry Wilen, Erik S. Thomson, J. S. Wettlaufer, Peter L. Davies, Ido Braslavsky, Biophysical Journal, 92(2007)3663
7) "Sequence information can be obtained from single DNA molecules" Ido Braslavsky, Benedict Hebert, Emil Kartalov, and Stephen R. Quake, PNAS, 100(2003)3960 https://doi.org/10.1073/pnas.0230489100, F1000, Physics News Update.
6) "Objective-Type Dark Field Illumination for Scattering from Microbeads", Ido Braslavsky, Roee Amit, B. M. Jaffar Ali, Opher Gileadi, Amos Oppenheim, and Joel Stavans, Applied Optics, 40 (2001) 5650 https://doi.org/10.1364/AO.40.005650
5) "Compaction of Single DNA Molecules Induced by Binding of Integration Host Factor (IHF)", B. M. Jaffar Ali, Roee Amit, Ido Braslavsky,Amos B.Oppenheim, Opher Gileadi, and Joel Stavans, PNAS 98 (2001) 10658-10663 https://doi.org/10.1073/pnas.181029198
4) "The Double-Pyramid Structure of Dendritic Ice Growing From Supercooled Water" I. Braslavsky and S.G. Lipson, Journal of Crystal Growth 198-199 (1999) 56. https://doi.org/10.1016/S0022-0248(98)00990-7
3) "Imaging fields around growing crystals", by A. G. Notcovich, I. Braslavsky, S. G. Lipson, Journal of Crystal Growth 198-199 (1999) 10. https://doi.org/10.1016/S0022-0248(98)01233-0
2) "Interferometric Measurement of the Temperature Field in The Vicinity of Ice Crystals Growing From Supercooled Water" by I. Braslavsky and S.G. Lipson, Physica A 249 (1998) 190-195. https://doi.org/10.1016/S0378-4371(97)00465-2
1) "Electrofreezing Effect and Nucleation of Ice Crystals in Free Growth Experiments" I. Braslavsky and S.G. Lipson, Applied Physics Letter 72 (1998) 264-266. https://doi.org/10.1063/1.120705
Book Chapters:
B4) "Structure–Function of IBPs and Their Interactions with Ice." Bar-Dolev, M. ; K., B. ; Braslavsky, I. ; P.L, D. In Antifreeze Proteins ; Antifreeze Proteins ; Springer, Cham. 2020; Vol. 2. Publisher's Version Abstract
B3) “Freezing and melting hysteresis measurements in solutions of hyperactive antifreeze protein from an Antarctic bacteria”, Celik Y, Drori R, Graham L, Mok YF, Davies PL, Braslavsky I., 2011, Article in proceedings book of Physics and Chemistry of Ice. Edited by Furukawa Y., Sazaki G., Uchida T. and Watanabe N, Hokkaido University Press, Sapporo. arxiv, pdf.
B2) "Single Molecule Fluorescence Microscopy and its Applications to Single Molecule Sequencing by Cyclic Synthesis", B. Hebert and I. Braslavsky, in Book titled: "New High Throughput Technologies for DNA Sequencing and Genomics", Edited by Keith Mitchelson, ISBN-13: 978-0-444-52223-8, Elsevier
B1) "Interferometric Tomography Measurement of the Temperature Field in the Vicinity of a Dendritic Crystal Growing from a supercooled Melt" I. Braslavsky and S.G. Lipson, Transactions of Optical methods and data processing in heat and fluid flow, IMECHE, London 1998, p. 423-432. pdf
https://www.scientificamerican.com/podcast/episode/infrared-light-offers-a-cooler-way-to-defrost/
Labyrinth ice pattern formation induced by near-infrared irradiation :
http://advances.sciencemag.org/content/5/3/eaav1598?rss=1
https://www.nature.com/articles/d41586-019-01005-z
First author student Shlomit Guy Preis.
Phys.org How antifreeze proteins make ice crystals grow
Makor Rishon article on 3d Printing of Food by Professors Braslavsky and Shoseyov
Food Printing in the news Oct 2017: NRG, Jerusalem post.
The Atlantic: The Counterintuitive Way That Microbes Survive in Antarctica
The Economist, Feb 6th 2016 + Economist podcast (first 5 minutes)
HORIZON: the EU Research & Innovation magazine, October 2014
National Geographic article (המהדורה הישראלית), July 2013
Nature Methods cover of PNAS paper, March 2013
Science Daily, February 2013
Jerusalem Post on PNAS article, February 2013
Cover of the Roy Soc Interface, December 7 2012 issue.
Krill prize 2012
ERC Starter Grant 2011: Improved Cryopreservation using Ice Binding Proteins, HUJI Newsletter
PNAS 2010 Superheating: Ohio University , ScienceDaily, PhysOrg, 'In this Issue' section PNAS March 23 2010
NQPI news letter, Fall 2009, Team studies inner workings of anti-freeze proteins, by Emily Hubbell
BBC: Sub-zero proteins transform dessert, by Victoria Gill , Aug 2009
Cold Case : Office of Research Communications, Ohio University, May 2009
EMBO reports DOI: 10.1038/embor.2008.160 (Sep 2008) Philip Hunter, Harnessing Nature's wisdom. Turning to Nature for inspiration and avoiding her follies,
In sequence, Volume 2 - Number 15 | April 8, 2008 : Helicos Publishes M13 Genome Re-Sequencing Data , related article Physics Today, May 2007, Feb 2008 APS News: "Physics News in 2007" Related article
Perspectives: Research, Scholarship, and Creative Activity at Ohio University: Fending Off Freeze, Proteins take a bite out of frost
APS2007 : Scientific American , Physics update , ScienceDaily, Ohio University Press release
Ohio University NanoSpintronics and Nanomagnetics web site: "Brain Freeze" , by Anita Martin
APS 2006, Virtual pressroom, title: "Fluorescence microscopy studies of the antifreeze proteins"
Physics News Update 2003 Related article
Articles
58) Ice nucleation proteins self-assemble into large fibres to trigger freezing at near 0 °C, Thomas Hansen, Jocelyn Lee, Naama Reicher, Gil Ovadia, Shuaiqi Guo, Wangbiao Guo, Jun Liu, Ido Braslavsky, Yinon Rudich, Peter L Davies (2023) eLife 12:RP91976 https://doi.org/10.7554/eLife.91976.3
57) Accumulation of antifreeze proteins on ice is determined by adsorption, Thosar AU, Shalom Y, Braslavsky I, Drori R, Patel AJ, (2023) J. Am. Chem. Soc., 145:17597. https://pubs.acs.org/doi/10.1021/jacs.3c02705
56) Monitoring of freezing patterns within 3d collagen-Hydroxyapatite scaffolds using infrared thermography, Mutsenko V, Anastassopoulos E, Zaragotas D, Simaioforidou A, Tarusin D, Lauterboeck L, Sydykov B, Brunotte R, Brunotte K , Rozanski C, Petrenko AU, Braslavsky I, Glasmacher B and Gryshkov O,(2023), Cryobiology 111:57, https://doi.org/10.1016/j.cryobiol.2023.02.001,
55) Atomic force microscopy imaging of ice crystal surfaces formed in aqueous solutions containing ice-binding proteins, Chasnitsky M S, Cohen SR C, Rudich Y PI, Braslavsky I PI (2022), Journal of Crystal Growth, in a special issue for A. Chernov, edited by Jim DeYoreo. In Press, https://doi.org/10.1016/j.jcrysgro.2022.126961
54) Water-organizing motif continuity is critical for potent ice nucleation protein activity. Forbes, J., Bissoyi, A., Eickhoff, L., N. Reicher, T Hansen, CG. Bon, VK. Walker, T Koop, Y Rudich, I Braslavsky & PL. Davies, 2022, Nature Communications, 13, 5019; https://doi.org/10.1038/s41467-022-32469-9
53) Temperature Effect on Polymerase Fidelity, Xue Y, Braslavsky I, Quake SR, 2021, Journal of Biological Chemistry, 297(5):101270. https://doi.org/10.1016/j.jbc.2021.101270,
52) Adherent cell thawing by infrared radiation, A Bissoyi and I Braslavsky, 2021, Cryobiology,103,129; https://doi.org/10.1016/j.cryobiol.2021.08.002
51) Heat flux balance description of unidirectional freezing and melting dynamics on a translational temperature gradient stage, Michael Chasnitsky, Victor Yashunsky, Ido Braslavsky, International Journal of Thermal Sciences, 2020, 161, 106734; https://doi.org/10.1016/j.ijthermalsci.2020.106734
50) Ice Nucleation Properties of Ice-binding Proteins from Snow Fleas, Akalabya Bissoyi, Naama Reicher, Michael Chasnitsky, Sivan Arad,Thomas Koop,Yinon Rudich and Ido Braslavsky, Biomolecules 2019, 9(10), 532; https://doi.org/10.3390/biom9100532 (movie)
49) Improvement of sperm cryo-survival of cynomolgus macaque (Macaca fascicularis) by commercial egg-yolk–free freezing medium with type III antifreeze protein, Shengnan Wang, Yanchao Duan, YapingYan, Chen Adar, Ido Braslavsky, Bingbing Chen, Tianzhuang Huang, Shuai Qiu, Xi Li, Briauna Marie Inglis, Weizhi Ji, Wei Si, Animal Reproduction Science, 2019. 210,106177, https://doi.org/10.1016/j.anireprosci.2019.106177
48) Addressing Complex Matrix Interference Improves Multiplex Food Allergen Detection by Targeted LC–MS/MS, Derek Croote, Ido Braslavsky, Stephen R. Quake, Analytical Chemistry, 2019. https://doi.org/10.1021/acs.analchem.9b01388
47) Direct Cryo Writing of Aerogels via 3D Printing of Aligned Cellulose Nanocrystals Inspired by the Plant Cell Wall Doron Kam,Michael Chasnitsky, Chen Nowogrodski ,Ido Braslavsky,Tiffany Abitbol ,Shlomo Magdassi andOded Shoseyov (2019), Colloids Interfaces 2019, 3(2), 46; https://doi.org/10.3390/colloids3020046
46) Ice-binding proteins and the applicability and limitations of the kinetic pinning model, Chasnitsky M, Braslavsky I. (2019) .Phil. Trans. R. Soc. A 377: 20180391. https://doi.org/10.1098/rsta.2018.0391
45) Labyrinth ice pattern formation induced by near-infrared irradiation, Shlomit Guy Preis, Haim Chayet, Adam Katz, Victor Yashunsky, Avigail Kaner, Shimon Ullman, Ido Braslavsky, (2019), Science Advances, Vol 5, eaav1598. DOI: 10.1126/sciadv.aav1598,
https://www.nature.com/articles/d41586-019-01005-z
https://twitter.com/sciencemagazine/status1111984066734243840
44) Contrasting Behavior of Antifreeze Proteins: Ice Growth Inhibitors and Ice Nucleation Promotors, Lukas Eickhoff, Katharina Dreischmeier, Assaf Zipori, Vera Sirotinskaya, Chen Adar, Naama Reicher, Ido Braslavsky, Yinon Rudich, and Thomas Koop,J. Phys. Chem. Lett.2019105966-972, DOI: 10.1021/acs.jpclett.8b03719 Phys.org, ScienceDaily, EurekAlert!
43) Saturn-shaped ice burst pattern and fast basal binding of an ice-binding protein from an Antarctic bacterial consortium, Aleksei Kaleda, Lotem Haleva, Guy Sarusi, Tova Pinsky, Marco Mangiagalli, Maya Bar-Dolev, Marina Lotti, Marco Nardini, and Ido Braslavsky, Langmuir 2019 35,23, 7337-7346, DOI:10.1021/acs.langmuir.8b01914
42) Falling water ice affinity purification of ice-binding proteins, Chen Adar, Vera Sirotinskaya, Maya Bar Dolev, Tomer Friehmann, Ido Braslavsky, Scientific Reports 23 July 2018 https://doi.org/10.1038/s41598-018-29312-x
41) Protein-Water-Ice Contact Angle, Karlsson JOM, Braslavsky I, Elliott JAW . Langmuir 2019, 35, 23, 7383-7387. doi: 10.1021/acs.langmuir.8b01276.
40) Application of Algebraic Topology to Homologous Recombination of DNA Ido Braslavsky and Joel Stavans, iScience, (2018) 4, 64-67, https://doi.org/10.1016/j.isci.2018.05.008
39) Directional freezing for the cryopreservation of adherent mammalian cells on a substrate. Bahari L, Bein A, Yashunsky V, Braslavsky I (2018) PLoS ONE 13(2): e0192265. doi: https://doi.org/10.1371/journal.pone.0192265
38) Structure of a bacterial ice binding protein with two faces of interaction with ice. Mangiagalli M, Sarusi G, Kaleda A, Bar Dolev M, Nardone V , Vena VF, Braslavsky I, Lotti M, Nardini M . (2018) FEBS J. 285(9):1653-1666. doi: 10.1111/febs.14434
37) Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice, Shuaiqi Guo, Corey A. Stevens, Tyler D. R. Vance, Luuk L. C. Olijve, Laurie A. Graham, Robert L. Campbell, Saeed R. Yazdi, Carlos Escobedo, Maya Bar-Dolev, Victor Yashunsky, Ido Braslavsky, David N. Langelaan, Steven P. Smith, John S. Allingham, Ilja K. Voets and Peter L. Davies, Science Advances 09 Aug 2017:Vol. 3, no. 8, e1701440 DOI: 10.1126/sciadv.1701440 http://advances.sciencemag.org/content/3/8/e1701440
36) Ice-binding proteins—not only for ice growth control, Maya Bar Dolev & Ido Braslavsky (2017) Temperature, 4:2, 112-113, DOI: 10.1080/23328940.2017.1279255 http://www.tandfonline.com/doi/pdf/10.1080/23328940.2017.1279255
35) Cryo-protective effect of an ice-binding protein derived from Antarctic bacteria Marco Mangiagalli, Maya Bar-Dolev, Pietro Tedesco, Antonino Natalello, Aleksei Kaleda, Stefania Brocca, Donatella de Pascale, Sandra Pucciarelli, Cristina Miceli, Ido Braslavsky, Marina Lottio 2016 FEBS J 284:163-177 http://dx.doi.org/10.1111/febs.13965
34) Microfluidic Cold-Finger Device for the Investigation of Ice-Binding Proteins Lotem Haleva, Yeliz Celik, Maya Bar-Dolev, Natalya Pertaya-Braun, Avigail Kaner, Peter L. Davies, Ido Braslavsky Biophysical Journal, 111(6) 1143–1150 DOI: http://dx.doi.org/10.1016/j.bpj.2016.08.003
33) Putting life on ice: bacteria that bind to frozen water Maya Bar Dolev, Reut Bernheim, Shuaiqi Guo, Peter L. Davies, Ido Braslavsky J. R. Soc. Interface 13: 20160210. DOI: 10.1098/rsif.2016.0210
PDF movies Link to Interface Blog regarding the article.
32) Ice-Binding Proteins and Their Function, Maya Bar Dolev, Ido Braslavsky, and Peter L. Davies, Annu. Rev. Biochem. 2016. 85:515–42 DOI: 10.1146/annurev-biochem-060815-014546
31) The Grand Challenges of Organ Banking: Proceedings from the first global summit on complex tissue cryopreservation Jedediah K.Lewis, John C.Bischof, Ido Braslavsky, Kelvin G.M.Brockbank, Gregory M.Fahy, Barry J.Fuller, Yoed Rabin, Alessandro Tocchio, Erik J.Woods, Brian G.Wowk, Jason P.Acke, Sebastian Giwa, 2016, Cryobiology, 72:169-182, DOI:10.1016/j.cryobiol.2015.12.001
30) Stevens CA, Drori R, Zalis S , Braslavsky I , Davies PL. (2015) Dendrimer-Linked Antifreeze Proteins Have Superior Activity and Thermal Recovery. Bioconjug Chem. 26:1908-15.
29) "When are antifreeze proteins in solution essential for ice growth inhibition?", Ran Drori , Peter L. Davies , and Ido Braslavsky, Langmuir 31:5805–5811 DOI: 10.1021/acs.langmuir.5b00345
28) “Experimental Correlation between Thermal Hysteresis Activity and the Distance between Antifreeze Proteins on an Ice Surface”, Ran Drori, Peter L. Davies and Ido Braslavsky, RSC Adv., 2015,5, 7848-7853 . DOI: 10.1039/C4RA12638F
27) "Ice-Binding Proteins that Accumulate on Different Ice Crystal Planes Produces Distinct Thermal Hysteresis Dynamics", Drori, R., Celik, Y., Davies, P.L., and Braslavsky, I., 9 July 2014 doi: 10.1098/ rsif.2014.0526 J. R. Soc. Interface 6 September 2014 vol. 11
26) "Determining the ice-binding planes of antifreeze proteins by fluorescence-based ice plane affinity", Basu, K., Garnham, C.P., Nishimiya, Y., Tsuda, S., Braslavsky, I., Davies, P.L.. Jan 2014. J. Vis. Exp. (83), e51185 PubMed: 24457629
25) "Model of pore formation in a single cell in a flow-through channel with micro-electrodes", Kaner A, Braslavsky I, Rubinsky B., Biomed Microdevices. 16:181–189 https://doi.org/10.1007/s10544-013-9820-6 2013 Oct 23
24) "Recent experimental results show the irreversible binding of antifreeze proteins to ice surfaces", Yeliz Celik, Ran Drori, Natalya Pertaya-Braun, Maya Bar-Dolev, Peter L. Davies, Ido Braslavsky. Cryobiology and cryotechnology 59(1), 15-21, 2013
23) "Inhibition of ice growth and recrystallization by zirconium acetate and zirconium acetate hydroxide", Ortal Mizrahy, Maya Bar-Dolev, Shlomit Guy and Ido Braslavsky, (2013) Plos One, 8(3): e59540. doi:10.1371/journal.pone.0059540
22) "Microfluidic experiments reveal that antifreeze proteins bound to ice crystals suffice to prevent their growth", Yeliz Celik, Ran Drori, Natalya Pertaya-Braun, Aysun Altan, Tyler Barton, Maya Bar-Dolev, Alex Groisman, Peter L. Davies, and Ido Braslavsky, PNAS. January 22, 2013.110(4)1309-1314.
21) "LabVIEW-operated Novel Nanoliter Osmometer for Ice Binding Protein Investigations", Ido Braslavsky, Ran Drori, Journal of Visualized Experiments. JoVE (72), e4189, doi:10.3791/4189 (2013).
20) "New Insights into Ice Growth and Melting Modifications by Antifreeze Proteins", Maya Bar-Dolev, Yeliz Celik, J.S. Wettlaufer, Peter L. Davies, and Ido Braslavsky, (2012) J. Royal Society Interface, 2012, 9:3249-59. https://doi.org/10.1098/rsif.2012.0388, Cover of the December 7 2012 issue.
19) “Modeling the Influence of Antifreeze Proteins on Three-Dimensional Ice Crystal Melt Shapes using a Geometric Approach” Jun Jie Liu, Yangzong Qin, Maya Bar Dolev, Yeliz Celik, J. S. Wettlaufer, and Ido Braslavsky, (2012) Proceedings of the Royal Society A, 2012, 468(2147):3311-3322. https://doi.org/10.1098/rspa.2011.0720
18) "Antifreeze Protein from Freeze-Tolerant Grass Has a Beta-Roll Fold with an Irregularly Structured Ice-Binding Site", Adam J. Middleton, Christopher B. Marshall, Frédérick Faucher, Maya Bar-Dolev, Ido Braslavsky, Robert L. Campbell, Virginia K. Walker, Peter L. Davies, Journal of Molecular Biology, 2012 416:713–724.
17) "Compound ice-binding site of an antifreeze protein revealed by mutagenesis and fluorescent tagging" Christopher P. Garnham , Aditya Natarajan , Adam J. Middleton , Mike J. Kuiper , Ido Braslavsky , and Peter L. Davies, 2010 , Biochemistry, 49: 9063-9071.
16) "Superheating of ice crystals in antifreeze protein solutions", Yeliz Celik, Laurie A. Graham, Yee-Foong Mok, Maya Bar, Peter L. Davies, and Ido Braslavsky, PNAS, 2010 107(12)5423-5428, pdf, Supporting information , 'In this Issue' section PNAS March 23 2010, Related news item 2014
15) "Structural basis for the superior activity of the large isoform of snow flea antifreeze protein", Mok YF,Lin FH,Graham LA,Celik Y,Braslavsky I,Davies PL., Biochemistry, 2010 49(11)2593-2603
14) "Caught in the act: the lifetime of synaptic intermediates during the search for homology on DNA", Adam Mani, Ido Braslavsky, Rinat Arbel-Goren, and Joel Stavans, Nucleic Acids Research 38:2036–2043, https://doi.org/10.1093/nar/gkp1177
13) "Universality of Persistence Exponents in Twodimensional Ostwald Ripening", Jordi Soriano, Ido Braslavsky, Di Xu, Oleg Krichevsky and Joel Stavans, PRL, 2009, 103(22)226101.
12) "Direct visualization of spruce budworm antifreeze protein interacting with an ice crystal: basal plane affinity confers hyperactivity" Natalya Pertaya, Christopher B. Marshall, Yeliz Celik, Peter L. Davies, Ido Braslavsky, Biophysical Journal, 2008, 95(1)333-342. related news
11) "Interactions of β-helical Antifreeze Protein Mutants with Ice", Maya Bar, Yeliz Celik, Deborah Fass, Ido Braslavsky, Crystal Growth & Design 2008, 8, 8, 2954-2963 https://doi.org/10.1021/cg800066g
10) "Single Molecule DNA Sequencing of a Viral Genome", Timothy D. Harris, Phillip R. Buzby, Hazen Babcock, Eric Beer, Jayson Bowers, Ido Braslavsky, Marie Causey, Jennifer Colonell, James DiMeo, J. William Efcavitch, Eldar Giladi, Jaime Gill, John Healy, Mirna Jarosz, Dan Lapen, Keith Moulton, Stephen R. Quake, Kathleen Steinmann, Edward Thayer, Anastasia Tyurina, Rebecca Ward, Howard Weiss, Zheng Xie,Science, April 4, 2008, Vol. 320 pp. 106-109
9) "Growth-melt asymmetry in ice crystals under the influence of spruce budworm antifreeze protein", Natalya Pertaya, Yeliz Celik, Carlos L. DiPrinzio, J. S. Wettlaufer, Peter L. Davies, Ido Braslavsky. J. Phys.: Condens. Matter 19 (2007) 412101 https://doi.org/10.1088/0953-8984/19/41/412101
8) "Fluorescence microscopy evidence for quasi-permanent attachment of antifreeze proteins to ice surfaces", Natalya Pertaya, Christopher B. Marshall, Carlos L. DiPrinzio, Larry Wilen, Erik S. Thomson, J. S. Wettlaufer, Peter L. Davies, Ido Braslavsky, Biophysical Journal, 92(2007)3663
7) "Sequence information can be obtained from single DNA molecules" Ido Braslavsky, Benedict Hebert, Emil Kartalov, and Stephen R. Quake, PNAS, 100(2003)3960 https://doi.org/10.1073/pnas.0230489100, F1000, Physics News Update.
6) "Objective-Type Dark Field Illumination for Scattering from Microbeads", Ido Braslavsky, Roee Amit, B. M. Jaffar Ali, Opher Gileadi, Amos Oppenheim, and Joel Stavans, Applied Optics, 40 (2001) 5650 https://doi.org/10.1364/AO.40.005650
5) "Compaction of Single DNA Molecules Induced by Binding of Integration Host Factor (IHF)", B. M. Jaffar Ali, Roee Amit, Ido Braslavsky,Amos B.Oppenheim, Opher Gileadi, and Joel Stavans, PNAS 98 (2001) 10658-10663 https://doi.org/10.1073/pnas.181029198
4) "The Double-Pyramid Structure of Dendritic Ice Growing From Supercooled Water" I. Braslavsky and S.G. Lipson, Journal of Crystal Growth 198-199 (1999) 56. https://doi.org/10.1016/S0022-0248(98)00990-7
3) "Imaging fields around growing crystals", by A. G. Notcovich, I. Braslavsky, S. G. Lipson, Journal of Crystal Growth 198-199 (1999) 10. https://doi.org/10.1016/S0022-0248(98)01233-0
2) "Interferometric Measurement of the Temperature Field in The Vicinity of Ice Crystals Growing From Supercooled Water" by I. Braslavsky and S.G. Lipson, Physica A 249 (1998) 190-195. https://doi.org/10.1016/S0378-4371(97)00465-2
1) "Electrofreezing Effect and Nucleation of Ice Crystals in Free Growth Experiments" I. Braslavsky and S.G. Lipson, Applied Physics Letter 72 (1998) 264-266. https://doi.org/10.1063/1.120705
Book Chapters:
B4) "Structure–Function of IBPs and Their Interactions with Ice." Bar-Dolev, M. ; K., B. ; Braslavsky, I. ; P.L, D. In Antifreeze Proteins ; Antifreeze Proteins ; Springer, Cham. 2020; Vol. 2. Publisher's Version Abstract
B3) “Freezing and melting hysteresis measurements in solutions of hyperactive antifreeze protein from an Antarctic bacteria”, Celik Y, Drori R, Graham L, Mok YF, Davies PL, Braslavsky I., 2011, Article in proceedings book of Physics and Chemistry of Ice. Edited by Furukawa Y., Sazaki G., Uchida T. and Watanabe N, Hokkaido University Press, Sapporo. arxiv, pdf.
B2) "Single Molecule Fluorescence Microscopy and its Applications to Single Molecule Sequencing by Cyclic Synthesis", B. Hebert and I. Braslavsky, in Book titled: "New High Throughput Technologies for DNA Sequencing and Genomics", Edited by Keith Mitchelson, ISBN-13: 978-0-444-52223-8, Elsevier
B1) "Interferometric Tomography Measurement of the Temperature Field in the Vicinity of a Dendritic Crystal Growing from a supercooled Melt" I. Braslavsky and S.G. Lipson, Transactions of Optical methods and data processing in heat and fluid flow, IMECHE, London 1998, p. 423-432. pdf